Publications and Presentations of Toshiaki OMORI

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- Refereed Research Articles -
  1. Keisuke Ota, Toshiaki Omori, Shigeo Watanabe, Hiroyoshi Miyakawa, Masato Okada and Toru Aonishi
    "Measurement of Infinitesimal Phase Response Curves from Noisy Real Neurons"
    Physical Review E, accepted.
  1. Takamasa Tsunoda, Yoshiaki Oda, Toshiaki Omori, Masato Okada, Masashi Inoue, Hiroyoshi Miyakawa and Toru Aonishi
    "Statistical Calibration Method for Physiological Ca2+ Fluorescence Signals"
    Australian Journal of Intelligent Information Processing Systems, accepted.
  1. Takamasa Tsunoda, Toshiaki Omori, Hiroyoshi Miyakawa, Masato Okada and Toru Aonishi
    "Estimation of Intracellular Calcium Ion Concentration by Nonlinear State Space Modeling and EM Algorithm for Parameter Estimation"
    Journal of the Physical Society of Japan, accepted.
  1. Toshiaki Omori, Toru Aonishi, and Masato Okada
    "Switch of Encoding Characteristics in Single Neurons by Subthreshold and Suprathreshold Stimuli"
    Physical Review E, accepted.
  1. Hiromu Monai, Toshiaki Omori, Masato Okada, Masashi Inoue, Hiroyoshi Miyakawa, and Toru Aonishi
    "An Analytic Solution of the Cable Equation Predicts Frequency Preference of a Passive Shunt-End Cylindrical Cable in Response to Extracellular Oscillating Electric Fields"
    Biophysical Journal, accepted.
  1. Yuichiro Shimizu, Toshiaki Omori, Toru Aonishi, Masato Okada
    "Estimation of Membrane Electric Property of Dendrite"
    IPSJ Transactions on Mathematical Modeling and Its Applications, Vol. 3 No. 2, pp. 92-98 (2010).
  1. Takamasa Tsunoda, Toshiaki Omori, Hiroyoshi Miyakawa, Masato Okada, Toru Aonishi
    "Estimation of Intracellular Calcium Dynamics by Partcle Filter"
    IPSJ Transactions on Mathematical Modeling and Its Applications, Vol. 3, No. 2, pp. 74-82 (2010).
  1. Munenori Iida, Toshiaki Omori, Toru Aonishi, Masato Okada
    "Phase Response Curve of Spike Response Model"
    IPSJ Transactions on Mathematical Modeling and Its Applications, Vol. 3, No. 2, pp. 44-50 (2010).
  1. Keisuke Ota, Takamasa Tsunoda, Toshiaki Omori, Shigeo Watanabe, Hiroyoshi Miyakawa, Masato Okada and Toru Aonishi
    "Is the Langevin Phase Equation an Efficient Model for Oscillating Neurons?"
    Journal of Physics: Conference Series, Vol. 197, 012016 (2009).
  1. Jun Kitazono, Toshiaki Omori and Masato Okada
    "Neural Network Model with Discrete and Continuous Information Representation"
    Journal of the Physical Society of Japan, Vol. 78, No. 11, 114801 (2009).
  1. Toshiaki Omori, Toru Aonishi, Hiroyoshi Miyakawa, Masashi Inoue and Masato Okada
    "Steep Decrease in the Specific Membrane Resistance in the Apical Dendrites of Hippocampal CA1 Pyramidal Neurons"
    Neuroscience Research, Vol. 64, pp. 83-95 (2009). download
  1. Keisuke Ota, Toshiaki Omori and Toru Aonishi
    "MAP Estimation Algorithm for Phase Response Curves Based on Analysis of the Observation Process"
    Journal of Computational Neuroscience, Vol.26, pp. 185-202 (2009).
  1. Florent Cousseau, Kazushi Mimura, Toshiaki Omori and Masato Okada
    "Statistical Mechanics of Lossy Compression for Nonmonotonic Multilayer Perceptrons"
    Physical Review E, Vol. 78, 021124 (2008).
  1. Masashi Inoue, Toshiaki Omori
    "Optical Recording of Neuronal Response to Perturbation and Estimation of Membrane Property by Numerical Simulation"
    Simulation, Vol. 25, No. 1, pp. 13-19 (2006).
  1. Toshiaki Omori, Toru Aonishi, Hiroyoshi Miyakawa, Masashi Inoue and Masato Okada
    "Estimated Distribution of Specific Membrane Resistance in Hippocampal CA1 Pyramidal Neuron"
    Brain Research, Vol. 1125, pp. 199-208 (2006). download
  1. Toshiaki Omori and Tsuyoshi Horiguchi
    "Dynamical State Transition by Neuromodulation Due to Acetylcholine in Neural Network Model for Oscillatory Phenomena in Thalamus"
    Journal of the Physical Society of Japan, Vol. 73, No. 12, pp. 3489-3494 (2004)
  1. Toshiaki Omori and Tsuyoshi Horiguchi
    "Dynamical Neural Network Model of Hippocampus with Excitatory and Inhibitory Neurons"
    Journal of the Physical Society of Japan, Vol. 73, No. 3, pp. 749-755 (2004).
  1. Toshiaki Omori and Tsuyoshi Horiguchi
    "Dynamical Properties of Neural Network Model for Working Memory with Hodgkin-Huxley Neurons"
    Physica A, Vol. 334, pp. 600-614 (2004).
  1. Toshiaki Omori and Tsuyoshi Horiguchi
    "Noise Effect on Memory Recall in Dynamical Neural Network Model of Hippocampus"
    Journal of the Physical Society of Japan, Vol. 71, No. 6, pp. 1598-1604 (2002).

- Review Articles -
  1. Toshiaki Omori and Masato Okada
    "Mathematical Models of Hippocampal System"
    Clinical Neuroscience, in press.
- Refereed Conference Proceedings -
  1. Munenori Iida, Toshiaki Omori, Toru Aonishi, and Masato Okada
    Proceedings of 18th International Conference on Neural Information Processing, accepted for publication.
  1. Toshiaki Omori, Toru Aonishi, and Masato Okada
    "Statistical Estimation of Non-Uniform Distribution of Dendritic Membrane Properties"
    Proceedings of 3rd International Conference on Cognitive Neurodynamics, accepted for publication.
  1. Toshiaki Omori, Toru Aonishi, Hiroyoshi Miyakawa, Masashi Inoue and Masato Okada
    "Estimation of Non-Uniform Membrane Property over the Dendrite: Data Assimilation Approach using Bioimaging Data and Multi-Compartment Model"
    Proceedings of Asia Simulation Conference 2009, pp. 90-1--90-8 (2009).
  1. Takamasa Tsunoda, Toshiaki Omori, Hiroyoshi Miyakawa, Masato Okada and Toru Aonishi
    "Estimation of Intracellular Calcium Ion Concentration by Nonlinear State Space Modeling"
    Proceedings of Asia Simulation Conference 2009, pp. 31-1--31-8 (2009).
  1. Toru Aonishi, Takamasa Tsunoda, Keisuke Ota, Toshiaki Omori, Masato Okada and Hiroyoshi Miyakawa
    "Fusion of Real Neuron and Mathematical Model by using Dynamic Clamp Technique"
    Proceedings of Asia Simulation Conference 2009, pp. 28-1--28-8 (2009).
  1. Toshiaki Omori and Tsuyoshi Horiguchi
    "Dynamical Neuromodulation in Neural Network with Inhibitory Neurons and Cholinergic Neurons"
    Proceedings of 2003 Workshop on Information-Based Induction Sciences, pp. 95-100 (2003).
  1. Toshiaki Omori and Tsuyoshi Horiguchi
    "Oscillatory Phenomena in Hippocampal CA3 Model with Excitatory and Inhibitory Neurons"
    Proceedings of 9th International Conference on Neural Information Processing, Vol. 3, pp. 1597-1601 (2002).

- Theses for Degrees -

- Presentations in International Conferences -
  1. Toshiaki Omori, Toru Aonishi, Hiroyoshi Miyakawa, Masashi Inoue, and Masato Okada
    "Estimation of Non-Uniform Membrane Property over the Dendrite: Data Assimilation Approach Using Bioimaging Data and Multi-Compartment Model"
    Asia Simulation Conference 2009, accepted.
  1. Keisuke Ota, Toshiaki Omori, Shigeo Watanabe, Hiroyoshi Miyakawa, Masato Okada, and Toru Aonishi
    "Is the Langevin Phase Equation an Efficient Model for Stochastic Limit Cycle Oscillators in Real Neurons?"
    18th Annual Computational Neuroscience Meeting (CNS*2009),
    Berlin, Germany, Jul. (2009).
  1. Hiromu Monai, Toshiaki Omori, Masato Okada, Masashi Inoue, Hiroyoshi Miyakawa, and Toru Aonishi
    "An Analytical Solution of the Cable Equation Predicts the Frequency Preference of a Passive Non-Uniform Cylindrical Cable in Response to Extracellular Oscillating Electrical Fields"
    18th Annual Computational Neuroscience Meeting (CNS*2009),
    Berlin, Germany, Jul. (2009).
  1. Munenori Iida, Toshiaki Omori, Toru Aonishi, and Masato Okada
    "Phase Response Curve of Spike Response Model"
    Computational and Systems Neuroscience (cosyne 2009),
    Salt Lake City, USA, Feb. 29 (2009).
  1. Keisuke Ota, Toru Aonishi, Shigeo Watanabe, Hiroyoshi Miyakawa, Toshiaki Omori, and Masato Okada
    "Bayesian Restoration of Phase Response Curves and Prediction of Stochastic Behavior of Hippocampal CA1 Pyramidal Neurons"
    Computational and Systems Neuroscience (cosyne 2008),
    Salt Lake City, USA, Feb. 29 (2008).
  1. Keisuke Ota, Toru Aonishi, Shigeo Watamabe, Hiroyoshi Miyakawa, Toshiaki Omori, and Masato Okada
    "Estimation of Phase Response Curves in Hippocampal CA1 Pyramidal Neuron Based on Bayesian Approach"
    37th Annual Meeting, Society for Neuroscience,
    San Diego, USA, Nov. 7 (2007).
  1. Toshiaki Omori, Toru Aonishi and Masato Okada
    "Non-Uniformity of Membrane Resistance Improves Dendritic Signal Transfer"
    37th Annual Meeting, Society for Neuroscience,
    San Diego, USA, Nov. 4 (2007).
  1. Toshiaki Omori, Toru Aonishi and Masato Okada
    "Improvement of Dendritic Signal Transfer Due to Non-Uniform Membrane Property"
    Computational and Systems Neuroscience (cosyne 2007),
    Salt Lake City, USA, Feb. 22 (2007).
  1. Toshiaki Omori, Toru Aonishi, Hiroyoshi Miyakawa, Masashi Inoue and Masato Okada
    "Steep Decrease of Specific Membrane Resistance in Hippocampal CA1 Pyramidal Neuron"
    36th Annual Meeting, Society for Neuroscience
    Atlanta, USA, Oct. (2006).
  1. Toshiaki Omori, Toru Aonishi, Hiroyoshi Miyakawa, Masashi Inoue and Masato Okada
    "Non-Uniform Passive Membrane Property in Dendrite Estimated by Fitting Multi-Compartment Model to Voltage Imaging Data"
    Computational and Systems Neuroscience (cosyne 2006),
    Salt Lake City, USA, Mar. (2006).
  1. Toshiaki Omori, Toru Aonishi, Hiroyoshi Miyakawa, Masashi Inoue and Masato Okada
    "Non-uniform Distribution of Specific Membrane Resistance in Hippocampal CA1 Pyramidal Neuron Estimated Using Multi-compartment Model"
    Japan-Germany Symposium on Computational Neuroscience
    Wako, Japan, Feb. 4 (2006).
  1. Toshiaki Omori, Toru Aonishi, Hiroyoshi Miyakawa, Masashi Inoue and Masato Okada
    "Estimated Distribution of Specific Membrane Resistance in Hippocampal CA1 Pyramidal Neuron"
    35th Annual Meeting, Society for Neuroscience
    Washington DC, USA, Nov. 15 (2005).
  1. Toshiaki Omori, Toru Aonishi, Hiroyoshi Miyakawa, Masashi Inoue and Masato Okada
    "Estimation of Distribution of Membrane Resistance in Hippocampal CA1 Pyramidal Neuron"
    Computational and Systems Neuroscience (cosyne 2005),
    Salt Lake City, USA, Mar. 19 (2005).
  1. Toshiaki Omori, Masato Okada and Tsuyoshi Horiguchi
    "Effect of Neuromodulation Due to Acetylcholine on Oscillatory Phenomena in Neural Network Model of Thalamus"
    34th Annual Meeting, Society for Neuroscience
    San Diego, USA, Oct. 26 (2004).
  1. Toshiaki Omori and Tsuyoshi Horiguchi
    "Oscillatory Phenomena in Hippocampal CA3 Model with Excitatory and Inhibitory Neurons"
    9th International Conference on Neural Information Processing ICONIP '02,
    Singapore, Nov. 20 (2002).
  1. Toshiaki Omori and Tsuyoshi Horiguchi
    "Dynamical Properties by Circulatory Neural Network Model of Hippocampus"
    21st IUPAP International Conference on Statistical Physics STATPHYS21,
    Cancun, Mexico, Jul. 20 (2001).
  1. Toshiaki Omori and Tsuyoshi Horiguchi
    "Noise Effect on Dynamical Neural Network Model of Hippocampus"
    International Conference on Dynamical Aspects of Complex Systems from Cells to Brain,
    Sendai, Japan, Nov. 30 (2000).

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